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Microscopic colitis

Last updated: August 21, 2025

Summarytoggle arrow icon

Microscopic colitis is an idiopathic inflammatory disease of the colon that manifests as chronic, nonbloody, watery diarrhea. There are three subtypes: lymphocytic colitis, collagenous colitis, and incomplete microscopic colitis. The condition is most common in women over 60 years of age and is associated with smoking, certain medications (e.g., NSAIDs and PPIs), and other autoimmune diseases. Diagnosis is based on the presence of chronic, watery diarrhea, a normal-appearing colon on colonoscopy, and characteristic histological findings in colon biopsy specimens. Treatment involves discontinuing offending agents and initiating pharmacological treatment (e.g., budesonide) to induce and maintain remission. Although the clinical course is variable, microscopic colitis is not associated with an increased risk of mortality.

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Definitionstoggle arrow icon

Outcomes and treatment recommendations do not differ between subtypes. [3]

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Epidemiologytoggle arrow icon

Epidemiological data refers to the US, unless otherwise specified.

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Etiologytoggle arrow icon

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Pathophysiologytoggle arrow icon

The pathogenesis is complex and not fully understood, but several mechanisms have been proposed. [1]

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Clinical featurestoggle arrow icon

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Diagnosistoggle arrow icon

  • Consider microscopic colitis in adults with chronic diarrhea. [3]
  • Screen for diarrhea red flags that suggest an organic cause of diarrhea. [1]
  • Refer to gastroenterology.
  • Histopathological analysis of colon biopsy specimens is required to confirm the diagnosis. [4]
  • Routine blood tests are not diagnostic but may be used to rule out differential diagnoses. [1]
  • Assess for electrolyte abnormalities and dehydration in severe cases. [4]

The colon typically appears normal on colonoscopy. [3]

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Differential diagnosestoggle arrow icon

See “Etiology of chronic diarrhea.”

The differential diagnoses listed here are not exhaustive.

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Treatmenttoggle arrow icon

General principles [2][3][4]

Pharmacological treatment [3]

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Prognosistoggle arrow icon

  • Variable disease course: Spontaneous remission, intermittent symptoms, or chronic and progressive disease can occur. [4]
  • Microscopic colitis is not associated with an increased risk of mortality or colorectal malignancy or adenoma. [2][3]
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